Shrewsbury lost 1-0 to Wigan after their League One relegation was confirmed earlier in the day.
Wrexham suffered a dent to their Sky Bet League One promotion hopes after being held 0-0 at Wigan.
Reece Cole's second-half equaliser earned Exeter a 1-1 draw in their League One clash with Wigan at St James Park.
Leyton Orient's hopes of closing in on the League One play-off spots were dented by a 0-0 home draw against struggling Wigan at Brisbane Road.
Chris Forino's stoppage-time goal gave Bolton their first victory over League One neighbours Wigan in more than a decade.
Ryan Lowe marked his first home game in charge of Wigan with a 1-1 draw against Barnsley in Sky Bet League One.
In Behind the Whistle, former Premier League referee Chris Foy goes through a selection of key match decisions from the weekend EFL action.
Matty Godden's first-half double earned promotion-chasing Charlton a seventh successive Sky Bet League One home win, 2-1 at home to Wigan.
Substitute Luke Robinson scored the only goal with 13 minutes remaining to give managerless Wigan a 1-0 victory over League One strugglers Cambridge.
Managerless Wigan produced some gritty defending to draw 0-0 at fellow strugglers Mansfield in League One.
Reading scored twice in the last 20 minutes as they came from 1-0 down to win 2-1 at Wigan in League One.
First-half goals from Dale Taylor and Owen Dale handed Wigan a narrow 2-1 victory over Sky Bet League One promotion-hopefuls Huddersfield.
Wycombe missed the chance to close the gap on league leaders Birmingham as they were held to a 0-0 draw at home to Wigan.
Charlie Barker equalised just before the break as struggling Crawley rescued a much-needed point in a 1-1 League One draw with Wigan at the Broadfield Stadium.
Two goals in the space of three minutes in the final quarter saw Stockport cement their Sky Bet League One play-off credentials with a 2-0 victory at struggling Wigan.
Rodrigo Muniz's double saw Fulham survive a scare at Wigan as Marco Silva's side progressed to the FA Cup fifth round.
James Collins converted an 88th-minute penalty at the second attempt to rescue a point for Lincoln at Wigan in Sky Bet League One.
Mahamadou Susoho's first goal for Peterborough gave the Sky Bet League One strugglers a much-needed 1-0 victory over Wigan at the Weston Homes Stadium.
Jamie Carragher's son, James, scored the opener for Wigan, making it his first professional goal for the side in their League One clash against Bristol Rovers.
In Behind the Whistle, former Premier League referee Chris Foy goes through a selection of key match decisions from the weekend EFL action.